env_parallel - export environment to GNU parallel
env_parallel [--record-env|--session|--end-session] [options for GNU Parallel]
env_parallel is a shell function that exports the current environment to GNU parallel.
If the shell function is not loaded, a dummy script will be run instead that explains how to install the function.
env_parallel is 100 ms slower at startup than pure GNU parallel, and takes up to 30% longer to start a job (typically 15 ms).
Due to the problem with environment space (see below) the recommended usage is either:
# Do --record-env into $PARALLEL_IGNORED_NAMES env_parallel --session # Define whatever you want to use myfunc() { myalias and functions $myvar work. $1.; } alias myalias=echo Aliases myvar=and variables # env_parallel will not export names in $PARALLEL_IGNORED_NAMES env_parallel -S localhost myfunc ::: Hooray
Or:
# Record the "clean" environment (this only needs to be run once) env_parallel --record-env # Optionally edit ~/.parallel/ignored_vars (only needed once) # Define whatever you want to use myfunc() { myalias and functions $myvar work. $1.; } alias myalias=echo Aliases myvar=and variables # Use --env _ to only transfer the names not in the "empty" environment env_parallel --env _ -S localhost myfunc ::: Hooray
In csh --session is not supported:
# Record the "clean" environment - this only needs to be run once env_parallel --record-env # Optionally edit ~/.parallel/ignored_vars - only needed once # Define whatever you want to use alias myalias echo Aliases $myvar \!*. set myvar=and variables # Use --env _ to only transfer the names not in the "empty" environment env_parallel --env _ -S localhost myalias ::: work
By default env_parallel will export all environment variables, arrays, aliases, functions and shell options (see details for the individual shells below).
But this only works if the size of the current environment is smaller than the maximal length of a command and smaller than half of the max if running remotely. E.g. The max size of Bash's command is 128 KB, so env_parallel will fail if 'set | wc -c' is bigger than 128 KB. Technically the limit is in execve(1) which IPC::open3 uses.
Bash completion functions are well-known for taking up well over 128 KB of environment space and the primary reason for causing env_parallel to fail.
Instead you can use --env to specify which variables, arrays, aliases and functions to export as this will only export those with the given name. Or follow the recommended usage in shown in DESCRIPTION.
Same as GNU parallel in addition to these:
Undo last --session
Record all names currently defined to be ignored every time running env_parallel in the future.
Ignore all names currently defined. Aliases, variables, arrays, and functions currently defined will not be transferred. But names defined after running parallel --session will be transferred. This is only valid in the running shell, and can be undone with parallel --end-session. You can run multiple --session inside each other: env_parallel --session var=not # var is transferred env_parallel -Slocalhost echo var is $var ::: ignored env_parallel --session # var is not transferred env_parallel -Slocalhost echo var is $var ::: ignored env_parallel --end-session # var is transferred again env_parallel -Slocalhost echo var is $var ::: ignored
Installation
Put this in $HOME
/.profile:
. `which env_parallel.ash`
E.g. by doing:
echo . `which env_parallel.ash` >> $HOME/.profile
Supported use
--env is supported to export only the variable, or alias with the given name. Multiple --envs can be given.
--session is supported.
alias myecho=echo aliases env_parallel myecho ::: work env_parallel -S server myecho ::: work env_parallel --env myecho myecho ::: work env_parallel --env myecho -S server myecho ::: work alias multiline=echo multiline echo aliases env_parallel multiline ::: work env_parallel -S server multiline ::: work env_parallel --env multiline multiline ::: work env_parallel --env multiline -S server multiline ::: work
ash cannot list defined functions - thus is not supported.
myvar=variables env_parallel echo $myvar ::: work env_parallel -S server echo $myvar ::: work env_parallel --env myvar echo $myvar ::: work env_parallel --env myvar -S server echo $myvar ::: work
Arrays are not supported by Ash.
Installation
Put this in $HOME
/.bashrc:
. `which env_parallel.bash`
E.g. by doing:
echo . `which env_parallel.bash` >> $HOME/.bashrc
Supported use
--env is supported to export only the variable, alias, function, or array with the given name. Multiple --envs can be given.
--session is supported.
alias myecho=echo aliases env_parallel myecho ::: work env_parallel -S server myecho ::: work env_parallel --env myecho myecho ::: work env_parallel --env myecho -S server myecho ::: work alias multiline=echo multiline echo aliases env_parallel multiline {}; echo but only when followed by a newline ::: work env_parallel -S server multiline {}; echo but only when followed by a newline ::: work env_parallel --env multiline multiline {}; echo but only when followed by a newline ::: work env_parallel --env multiline -S server multiline {}; echo but only when followed by a newline ::: work
myfunc() { echo functions $*; } env_parallel myfunc ::: work env_parallel -S server myfunc ::: work env_parallel --env myfunc myfunc ::: work env_parallel --env myfunc -S server myfunc ::: work
myvar=variables env_parallel echo $myvar ::: work env_parallel -S server echo $myvar ::: work env_parallel --env myvar echo $myvar ::: work env_parallel --env myvar -S server echo $myvar ::: work
myarray=(arrays work, too) env_parallel -k echo ${myarray[{}]} ::: 0 1 2 env_parallel -k -S server echo ${myarray[{}]} ::: 0 1 2 env_parallel -k --env myarray echo ${myarray[{}]} ::: 0 1 2 env_parallel -k --env myarray -S server \ echo ${myarray[{}]} ::: 0 1 2
BUGS
Due to a bug in Bash, aliases containing newlines must be followed by a newline in the command. Some systems are not affected by this bug, but will print a warning anyway.
env_parallel for csh breaks $PARALLEL
, so do not use $PARALLEL
.
Installation
Put this in $HOME
/.cshrc:
source `which env_parallel.csh`
E.g. by doing:
echo source `which env_parallel.csh` >> $HOME/.cshrc
Supported use
--env is supported to export only the variable, alias, or array with the given name. Multiple --envs can be given.
alias myecho echo aliases env_parallel myecho ::: work env_parallel -S server myecho ::: work env_parallel --env myecho myecho ::: work env_parallel --env myecho -S server myecho ::: work
Not supported by csh.
set myvar=variables env_parallel echo $myvar ::: work env_parallel -S server echo $myvar ::: work env_parallel --env myvar echo $myvar ::: work env_parallel --env myvar -S server echo $myvar ::: work
set myarray=(arrays work, too) env_parallel -k echo \${myarray[{}]} ::: 1 2 3 env_parallel -k -S server echo \${myarray[{}]} ::: 1 2 3 env_parallel -k --env myarray echo \${myarray[{}]} ::: 1 2 3 env_parallel -k --env myarray -S server \ echo \${myarray[{}]} ::: 1 2 3
Installation
Put this in $HOME
/.profile:
. `which env_parallel.dash`
E.g. by doing:
echo . `which env_parallel.dash` >> $HOME/.profile
Supported use
--env is supported to export only the variable, or alias with the given name. Multiple --envs can be given.
--session is supported.
alias myecho=echo aliases env_parallel myecho ::: work env_parallel -S server myecho ::: work env_parallel --env myecho myecho ::: work env_parallel --env myecho -S server myecho ::: work alias multiline=echo multiline echo aliases env_parallel multiline ::: work env_parallel -S server multiline ::: work env_parallel --env multiline multiline ::: work env_parallel --env multiline -S server multiline ::: work
dash cannot list defined functions - thus is not supported.
myvar=variables env_parallel echo $myvar ::: work env_parallel -S server echo $myvar ::: work env_parallel --env myvar echo $myvar ::: work env_parallel --env myvar -S server echo $myvar ::: work
dash does not support arrays.
Installation
Put this in $HOME
/.config/fish/config.fish:
source (which env_parallel.fish)
E.g. by doing:
echo source (which env_parallel.fish) \ >> $HOME/.config/fish/config.fish
Supported use
--env is supported to export only the variable, alias, function, or array with the given name. Multiple --envs can be given.
--session is supported.
alias myecho echo aliases env_parallel myecho ::: work env_parallel -S server myecho ::: work env_parallel --env myecho myecho ::: work env_parallel --env myecho -S server myecho ::: work
function myfunc echo functions $argv end env_parallel myfunc ::: work env_parallel -S server myfunc ::: work env_parallel --env myfunc myfunc ::: work env_parallel --env myfunc -S server myfunc ::: work
set myvar variables env_parallel echo $myvar ::: work env_parallel -S server echo $myvar ::: work env_parallel --env myvar echo $myvar ::: work env_parallel --env myvar -S server echo $myvar ::: work
set myarray arrays work, too env_parallel -k echo $myarray[{}] ::: 1 2 3 env_parallel -k -S server echo $myarray[{}] ::: 1 2 3 env_parallel -k --env myarray echo $myarray[{}] ::: 1 2 3 env_parallel -k --env myarray -S server \ echo $myarray[{}] ::: 1 2 3
Installation
Put this in $HOME
/.kshrc:
source `which env_parallel.ksh`
E.g. by doing:
echo source `which env_parallel.ksh` >> $HOME/.kshrc
Supported use
--env is supported to export only the variable, alias, function, or array with the given name. Multiple --envs can be given.
--session is supported.
alias myecho=echo aliases env_parallel myecho ::: work env_parallel -S server myecho ::: work env_parallel --env myecho myecho ::: work env_parallel --env myecho -S server myecho ::: work alias multiline=echo multiline echo aliases env_parallel multiline ::: work env_parallel -S server multiline ::: work env_parallel --env multiline multiline ::: work env_parallel --env multiline -S server multiline ::: work
myfunc() { echo functions $*; } env_parallel myfunc ::: work env_parallel -S server myfunc ::: work env_parallel --env myfunc myfunc ::: work env_parallel --env myfunc -S server myfunc ::: work
myvar=variables env_parallel echo $myvar ::: work env_parallel -S server echo $myvar ::: work env_parallel --env myvar echo $myvar ::: work env_parallel --env myvar -S server echo $myvar ::: work
myarray=(arrays work, too) env_parallel -k echo ${myarray[{}]} ::: 0 1 2 env_parallel -k -S server echo ${myarray[{}]} ::: 0 1 2 env_parallel -k --env myarray echo ${myarray[{}]} ::: 0 1 2 env_parallel -k --env myarray -S server \ echo ${myarray[{}]} ::: 0 1 2
Installation
Put this in $HOME
/.mkshrc:
source `which env_parallel.mksh`
E.g. by doing:
echo source `which env_parallel.mksh` >> $HOME/.mkshrc
Supported use
--env is supported to export only the variable, alias, function, or array with the given name. Multiple --envs can be given.
--session is supported.
alias myecho=echo aliases env_parallel myecho ::: work env_parallel -S server myecho ::: work env_parallel --env myecho myecho ::: work env_parallel --env myecho -S server myecho ::: work alias multiline=echo multiline echo aliases env_parallel multiline ::: work env_parallel -S server multiline ::: work env_parallel --env multiline multiline ::: work env_parallel --env multiline -S server multiline ::: work
myfunc() { echo functions $*; } env_parallel myfunc ::: work env_parallel -S server myfunc ::: work env_parallel --env myfunc myfunc ::: work env_parallel --env myfunc -S server myfunc ::: work
myvar=variables env_parallel echo $myvar ::: work env_parallel -S server echo $myvar ::: work env_parallel --env myvar echo $myvar ::: work env_parallel --env myvar -S server echo $myvar ::: work
myarray=(arrays work, too) env_parallel -k echo ${myarray[{}]} ::: 0 1 2 env_parallel -k -S server echo ${myarray[{}]} ::: 0 1 2 env_parallel -k --env myarray echo ${myarray[{}]} ::: 0 1 2 env_parallel -k --env myarray -S server \ echo ${myarray[{}]} ::: 0 1 2
Installation
Put this in $HOME
/.profile:
source `which env_parallel.pdksh`
E.g. by doing:
echo source `which env_parallel.pdksh` >> $HOME/.profile
Supported use
--env is supported to export only the variable, alias, function, or array with the given name. Multiple --envs can be given.
--session is supported.
alias myecho="echo aliases"; env_parallel myecho ::: work; env_parallel -S server myecho ::: work; env_parallel --env myecho myecho ::: work; env_parallel --env myecho -S server myecho ::: work
myfunc() { echo functions $*; }; env_parallel myfunc ::: work; env_parallel -S server myfunc ::: work; env_parallel --env myfunc myfunc ::: work; env_parallel --env myfunc -S server myfunc ::: work
myvar=variables; env_parallel echo "\$myvar" ::: work; env_parallel -S server echo "\$myvar" ::: work; env_parallel --env myvar echo "\$myvar" ::: work; env_parallel --env myvar -S server echo "\$myvar" ::: work
myarray=(arrays work, too); env_parallel -k echo "\${myarray[{}]}" ::: 0 1 2; env_parallel -k -S server echo "\${myarray[{}]}" ::: 0 1 2; env_parallel -k --env myarray echo "\${myarray[{}]}" ::: 0 1 2; env_parallel -k --env myarray -S server \ echo "\${myarray[{}]}" ::: 0 1 2
Installation
Put this in $HOME
/.profile:
. `which env_parallel.sh`
E.g. by doing:
echo . `which env_parallel.sh` >> $HOME/.profile
Supported use
--env is supported to export only the variable, or alias with the given name. Multiple --envs can be given.
--session is supported.
sh does not support aliases.
myfunc() { echo functions $*; } env_parallel myfunc ::: work env_parallel -S server myfunc ::: work env_parallel --env myfunc myfunc ::: work env_parallel --env myfunc -S server myfunc ::: work
myvar=variables env_parallel echo $myvar ::: work env_parallel -S server echo $myvar ::: work env_parallel --env myvar echo $myvar ::: work env_parallel --env myvar -S server echo $myvar ::: work
sh does not support arrays.
env_parallel for tcsh breaks $PARALLEL
, so do not use $PARALLEL
.
Installation
Put this in $HOME
/.tcshrc:
source `which env_parallel.tcsh`
E.g. by doing:
echo source `which env_parallel.tcsh` >> $HOME/.tcshrc
Supported use
--env is supported to export only the variable, alias, or array with the given name. Multiple --envs can be given.
alias myecho echo aliases env_parallel myecho ::: work env_parallel -S server myecho ::: work env_parallel --env myecho myecho ::: work env_parallel --env myecho -S server myecho ::: work
Not supported by tcsh.
set myvar=variables env_parallel echo $myvar ::: work env_parallel -S server echo $myvar ::: work env_parallel --env myvar echo $myvar ::: work env_parallel --env myvar -S server echo $myvar ::: work
set myarray=(arrays work, too) env_parallel -k echo \${myarray[{}]} ::: 1 2 3 env_parallel -k -S server echo \${myarray[{}]} ::: 1 2 3 env_parallel -k --env myarray echo \${myarray[{}]} ::: 1 2 3 env_parallel -k --env myarray -S server \ echo \${myarray[{}]} ::: 1 2 3
Installation
Put this in $HOME
/.zshrc:
. `which env_parallel.zsh`
E.g. by doing:
echo . `which env_parallel.zsh` >> $HOME/.zshenv
Supported use
--env is supported to export only the variable, alias, function, or array with the given name. Multiple --envs can be given.
--session is supported.
alias myecho=echo aliases env_parallel myecho ::: work env_parallel -S server myecho ::: work env_parallel --env myecho myecho ::: work env_parallel --env myecho -S server myecho ::: work alias multiline=echo multiline echo aliases env_parallel multiline ::: work env_parallel -S server multiline ::: work env_parallel --env multiline multiline ::: work env_parallel --env multiline -S server multiline ::: work
myfunc() { echo functions $*; } env_parallel myfunc ::: work env_parallel -S server myfunc ::: work env_parallel --env myfunc myfunc ::: work env_parallel --env myfunc -S server myfunc ::: work
myvar=variables env_parallel echo $myvar ::: work env_parallel -S server echo $myvar ::: work env_parallel --env myvar echo $myvar ::: work env_parallel --env myvar -S server echo $myvar ::: work
myarray=(arrays work, too) env_parallel -k echo ${myarray[{}]} ::: 1 2 3 env_parallel -k -S server echo ${myarray[{}]} ::: 1 2 3 env_parallel -k --env myarray echo ${myarray[{}]} ::: 1 2 3 env_parallel -k --env myarray -S server \ echo ${myarray[{}]} ::: 1 2 3
Same as GNU parallel.
When using GNU env_parallel for a publication please cite:
O. Tange (2018): GNU Parallel 2018, March 2018, ISBN 9781387509881, DOI: 10.5281/zenodo.1146014.
Copyright (C) 2007-10-18 Ole Tange, http://ole.tange.dk
Copyright (C) 2008-2010 Ole Tange, http://ole.tange.dk
Copyright (C) 2010-2021 Ole Tange, http://ole.tange.dk and Free Software Foundation, Inc.
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This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program. If not, see http://www.gnu.org/licenses/.
Permission is granted to copy, distribute and/or modify this documentation under the terms of the GNU Free Documentation License, Version 1.3 or any later version published by the Free Software Foundation; with no Invariant Sections, with no Front-Cover Texts, and with no Back-Cover Texts. A copy of the license is included in the file LICENSES/GFDL-1.3-or-later.txt.
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env_parallel uses GNU parallel.
parallel(1), ash(1), bash(1), csh(1), dash(1), fish(1), ksh(1), pdksh(1) tcsh(1), zsh(1).