gcloud beta healthcare fhir-stores import gcs - import FHIR resources from Google Cloud Storage into a Cloud Healthcare API FHIR store
gcloud beta healthcare fhir-stores import gcs (FHIR_STORE : --dataset=DATASET --location=LOCATION) --gcs-uri=GCS_URI [--async] [--content-structure=CONTENT_STRUCTURE] [GCLOUD_WIDE_FLAG ...]
(BETA) Import FHIR resources from Google Cloud Storage into a Cloud Healthcare API FHIR store.
To import the FHIR resources from the existing bucket 'testGcsBucket' in the folder 'someFolder' into the FHIR store 'test-fhir-store', run:
$ gcloud beta healthcare fhir-stores import gcs test-fhir-store \ --gcs-uri=gs://testGcsBucket/someFolder/* --dataset=test-dataset
To perform the same import, but importing resources with the content structure of 'RESOURCE', run:
$ gcloud beta healthcare fhir-stores import gcs test-fhir-store \ --gcs-uri=gs://testGcsBucket/someFolder/* \ --dataset=test-dataset --content-structure=RESOURCE
- FhirStore resource - Cloud Healthcare API FHIR store into which the data is
imported. The arguments in this group can be used to specify the attributes of this resource. (NOTE) Some attributes are not given arguments in this group but can be set in other ways. To set the project attribute:
- —
provide the argument fhir_store on the command line with a fully specified name;
- —
provide the argument --project on the command line;
- —
set the property core/project.
This must be specified.
- FHIR_STORE
ID of the fhirStore or fully qualified identifier for the fhirStore. To set the fhir_store attribute:
provide the argument fhir_store on the command line.
This positional argument must be specified if any of the other arguments in this group are specified.
- --dataset=DATASET
Cloud Healthcare dataset. To set the dataset attribute:
provide the argument fhir_store on the command line with a fully specified name;
provide the argument --dataset on the command line.
- --location=LOCATION
Google Cloud location. To set the location attribute:
provide the argument fhir_store on the command line with a fully specified name;
provide the argument --location on the command line;
set the property healthcare/location.
- --gcs-uri=GCS_URI
Cloud Storage source data locations. Each Cloud Storage object should be a text file that contains newline-delimited JSON structures conforming to the FHIR standard. You can use wildcards to import multiple files from one or more directories.
- —
Use * to match 0 or more non-separator characters. For example, gs://BUCKET/DIRECTORY/Example*.ndjson matches Example.ndjson and Example22.ndjson in DIRECTORY.
- —
Use ** to match 0 or more characters (including separators). Must be used at the end of a path and with no other wildcards in the path. Can also be used with a filename extension (such as .ndjson), which imports all files with the filename extension in the specified directory and its subdirectories. For example, gs://BUCKET/DIRECTORY/**.ndjson imports all files with the .ndjson filename extension in DIRECTORY and its subdirectories.
- —
Use ? to match 1 character. For example, gs://BUCKET/DIRECTORY/Example?.ndjson matches Example1.ndjson but does not match Example.ndjson or Example01.ndjson.
- --async
Return immediately, without waiting for the operation in progress to complete.
- --content-structure=CONTENT_STRUCTURE
Content structure in the source location. The default is BUNDLE. CONTENT_STRUCTURE must be one of:
- bundle
Each unit is a bundle, which contains one or more resources.
- bundle-pretty
The entire file is one JSON bundle. The JSON can span multiple lines.
- resource
Each unit is a single resource.
- resource-pretty
The entire file is one JSON resource. The JSON can span multiple lines.
These flags are available to all commands: --access-token-file, --account, --billing-project, --configuration, --flags-file, --flatten, --format, --help, --impersonate-service-account, --log-http, --project, --quiet, --trace-token, --user-output-enabled, --verbosity.
Run $ gcloud help for details.
This command uses the healthcare/v1beta1 API. The full documentation for this API can be found at: https://cloud.google.com/healthcare
This command is currently in beta and might change without notice. These variants are also available:
$ gcloud healthcare fhir-stores import gcs
$ gcloud alpha healthcare fhir-stores import gcs